Comparing 15418 FitnessBrowser__Keio:15418 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
P76038 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD; Gamma-Glu-GABA hydrolase; EC 3.5.1.94 from Escherichia coli (strain K12) (see paper)
100% identity, 100% coverage: 1:254/254 of query aligns to 1:254/254 of P76038
6vtvB Crystal structure of puud gamma-glutamyl-gamma-aminobutyrate hydrolase from e. Coli
100% identity, 99% coverage: 3:254/254 of query aligns to 1:252/252 of 6vtvB
7d53A Spua mutant - h221n with glu (see paper)
44% identity, 96% coverage: 8:251/254 of query aligns to 4:249/249 of 7d53A
7d50B Spua mutant - h221n with glutamyl-thioester (see paper)
44% identity, 96% coverage: 8:251/254 of query aligns to 10:255/255 of 7d50B
7d4rB Spua native structure (see paper)
41% identity, 93% coverage: 8:244/254 of query aligns to 2:210/215 of 7d4rB
3fijA Crystal structure of a uncharacterized protein lin1909
36% identity, 93% coverage: 7:241/254 of query aligns to 2:217/224 of 3fijA
O33341 Putative glutamine amidotransferase Rv2859c; EC 2.4.2.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
30% identity, 92% coverage: 6:238/254 of query aligns to 64:293/308 of O33341
1vcnA Crystal structure of t.Th. Hb8 ctp synthetase complex with sulfate anion (see paper)
31% identity, 49% coverage: 103:227/254 of query aligns to 353:486/506 of 1vcnA
Sites not aligning to the query:
>15418 FitnessBrowser__Keio:15418
MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLP
KLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAIINAALERRIPIFAICRGLQEL
VVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQVEEGGLLSALLPECSNFWVN
SLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWNSSEYALSRILFEGF
ITACQHHIAEKQRL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory