SitesBLAST
Comparing 199958 FitnessBrowser__MR1:199958 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
5bt9C Crystal structure of folm alternative dihydrofolate reductase 1 from brucella canis complexed with NADP
27% identity, 99% coverage: 2:238/239 of query aligns to 7:242/250 of 5bt9C
- active site: R18 (= R13), I140 (= I136), Y155 (= Y151), K159 (= K155)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G14 (= G9), R18 (= R13), I19 (= I14), H37 (≠ G31), C38 (≠ T32), N39 (≠ Y33), R40 (= R34), S41 (= S35), A64 (≠ C53), D65 (= D54), L66 (≠ F55), E67 (≠ N58), N90 (= N80), A91 (= A81), S92 (= S82), V113 (= V104), I140 (= I136), I141 (≠ T137), D142 (= D138), K159 (= K155), P184 (= P180), G185 (≠ A181), P186 (≠ M182), T187 (≠ I183), L188 (= L184)
6j7uA Crystal structure of blue fluorescent protein from metagenomic library in complex with NADPH (see paper)
31% identity, 96% coverage: 7:235/239 of query aligns to 10:244/247 of 6j7uA
- active site: G16 (≠ R13), S142 (≠ D138), Y156 (= Y151)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G12 (= G9), S14 (≠ G11), R15 (≠ K12), G16 (≠ R13), I17 (= I14), Y36 (= Y33), V37 (≠ R34), S38 (= S35), S41 (≠ P38), A64 (≠ C53), D65 (= D54), S66 (≠ F55), N92 (= N80), A93 (= A81), G94 (≠ S82), I115 (≠ V104), I140 (= I136), G141 (≠ T137), S142 (≠ D138), Y156 (= Y151), K160 (= K155), P186 (= P180), G187 (≠ A181), P188 (≠ M182), I189 (= I183), T191 (vs. gap), D192 (vs. gap), M193 (≠ F185), N194 (= N186)
P0A2C9 3-oxoacyl-[acyl-carrier-protein] reductase FabG; 3-ketoacyl-acyl carrier protein reductase; Beta-Ketoacyl-acyl carrier protein reductase; Beta-ketoacyl-ACP reductase; EC 1.1.1.100 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
27% identity, 97% coverage: 6:238/239 of query aligns to 9:243/244 of P0A2C9
- M125 (≠ L120) mutation to I: Loss of the temperature-sensitive phenotype; when associated with T-223.
- A223 (≠ L220) mutation to T: Loss of the temperature-sensitive phenotype; when associated with I-125.
- S224 (≠ N221) mutation to F: Distorts the local conformation and prevent stacking around Phe-221. The S224F mutation would additionally disrupt the hydrogen bond formed between Ser-224 and Glu-226.
5iz4A Crystal structure of a putative short-chain dehydrogenase/reductase from burkholderia xenovorans
30% identity, 91% coverage: 2:219/239 of query aligns to 4:226/247 of 5iz4A
- active site: G15 (≠ R13), S150 (≠ D138), S159 (≠ K147), Y163 (= Y151), K167 (= K155)
- binding adenosine-5'-diphosphate: G11 (= G9), A13 (≠ G11), S14 (≠ K12), G15 (≠ R13), I16 (= I14), F36 (≠ Y33), A63 (≠ C53), D64 (= D54), V65 (≠ F55), C91 (vs. gap), A92 (vs. gap), G93 (vs. gap), V117 (= V104)
1q7bA The structure of betaketoacyl-[acp] reductase from e. Coli in complex with NADP+ (see paper)
27% identity, 97% coverage: 6:238/239 of query aligns to 8:242/243 of 1q7bA
- active site: G15 (≠ R13), E101 (≠ V97), S137 (≠ D138), Q147 (≠ H148), Y150 (= Y151), K154 (= K155)
- binding calcium ion: E232 (≠ R228), T233 (≠ S229)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G11 (= G9), S13 (≠ G11), R14 (≠ K12), I16 (= I14), A35 (≠ Y33), T36 (≠ R34), L57 (≠ C53), N58 (≠ D54), V59 (≠ F55), N85 (= N80), A86 (= A81), G87 (≠ S82), I88 (≠ W84), T108 (≠ V104), I135 (= I136), G136 (≠ T137), S137 (≠ D138), Y150 (= Y151), K154 (= K155), P180 (= P180), G181 (≠ A181), F182 (≠ M182), I183 (= I183)
P0AEK2 3-oxoacyl-[acyl-carrier-protein] reductase FabG; 3-ketoacyl-acyl carrier protein reductase; Beta-Ketoacyl-acyl carrier protein reductase; Beta-ketoacyl-ACP reductase; EC 1.1.1.100 from Escherichia coli (strain K12) (see 2 papers)
27% identity, 97% coverage: 6:238/239 of query aligns to 9:243/244 of P0AEK2
- GASR 12:15 (≠ GVGK 9:12) binding
- T37 (≠ R34) binding
- NV 59:60 (≠ DF 54:55) binding
- N86 (= N80) binding
- Y151 (= Y151) mutation to F: Defect in the affinity for NADPH.
- YAAAK 151:155 (≠ YAASK 151:155) binding
- A154 (≠ S154) mutation to T: Decreases in the thermolability of the reductase; when associated with K-233.
- K155 (= K155) mutation to A: Defect in the affinity for NADPH.
- I184 (= I183) binding
- E233 (≠ R228) mutation to K: Decreases in the thermolability of the reductase; when associated with T-154.
1q7cA The structure of betaketoacyl-[acp] reductase y151f mutant in complex with NADPH fragment (see paper)
27% identity, 97% coverage: 6:238/239 of query aligns to 8:242/243 of 1q7cA
- active site: G15 (≠ R13), S137 (≠ D138), Q147 (≠ H148), F150 (≠ Y151), K154 (= K155)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G11 (= G9), S13 (≠ G11), R14 (≠ K12), A35 (≠ Y33), T36 (≠ R34), L57 (≠ C53), N58 (≠ D54), V59 (≠ F55), A86 (= A81), G87 (≠ S82), I88 (≠ W84), T108 (≠ V104)
6t77A Crystal structure of klebsiella pneumoniae fabg(NADPH-dependent) NADP- complex at 1.75 a resolution (see paper)
27% identity, 97% coverage: 6:238/239 of query aligns to 9:243/244 of 6t77A
- active site: G16 (≠ R13), S138 (≠ D138), Y151 (= Y151)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G9), S14 (≠ G11), R15 (≠ K12), A36 (≠ Y33), T37 (≠ R34), L58 (≠ C53), N59 (≠ D54), V60 (≠ F55), A87 (= A81), G88 (≠ S82), I89 (≠ W84), T109 (≠ V104)
4b79A The aeropath project and pseudomonas aeruginosa high-throughput crystallographic studies for assessment of potential targets in early stage drug discovery. (see paper)
29% identity, 97% coverage: 5:235/239 of query aligns to 13:232/236 of 4b79A
- active site: G21 (≠ R13), S133 (≠ D138), R143 (≠ H148), Y146 (= Y151), K150 (= K155)
- binding nicotinamide-adenine-dinucleotide: G17 (= G9), S19 (≠ G11), S20 (≠ K12), G21 (≠ R13), I22 (= I14), G41 (vs. gap), L42 (vs. gap), L60 (= L43), D61 (= D54), I62 (≠ F55), N84 (= N80), A85 (= A81), G86 (≠ S82), I87 (≠ D83), L105 (≠ M101), I131 (= I136), A132 (≠ T137), Y146 (= Y151), K150 (= K155), P176 (= P180), G177 (≠ A181), W178 (≠ M182), I179 (= I183), T181 (≠ F185)
6rxcA Leishmania major pteridine reductase 1 (lmptr1) in complex with inhibitor 4 (nmt-c0026)
24% identity, 99% coverage: 2:238/239 of query aligns to 1:260/263 of 6rxcA
- active site: R13 (= R13), D159 (= D138), Y172 (= Y151)
- binding methyl 1-[4-[[2,4-bis(azanyl)pteridin-6-yl]methyl-(3-oxidanylpropyl)amino]phenyl]carbonylpiperidine-4-carboxylate: R13 (= R13), S100 (≠ P90), F102 (= F92), D159 (= D138), L166 (≠ S145), Y169 (≠ H148), Y172 (= Y151), L204 (≠ M182), L207 (= L184)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G9 (= G9), K12 (= K12), R13 (= R13), L14 (≠ I14), H32 (≠ T32), Y33 (= Y33), H34 (≠ Y37), R35 (≠ P38), S36 (= S39), A60 (≠ C53), D61 (= D54), L62 (≠ F55), S63 (≠ Y56), N98 (= N88), A99 (≠ S89), S100 (≠ P90), S101 (≠ E91), D120 (vs. gap), S124 (≠ V104), M157 (≠ I136), V158 (≠ T137), D159 (= D138), Y172 (= Y151), K176 (= K155), P202 (= P180), G203 (≠ A181), L204 (≠ M182), S205 (vs. gap)
5gwrA 4-hydroxyisoleucine dehydrogenase complexed with nadh (see paper)
24% identity, 97% coverage: 5:235/239 of query aligns to 4:238/243 of 5gwrA
- active site: G12 (≠ R13), S134 (≠ D138), Y147 (= Y151), K151 (= K155)
- binding nicotinamide-adenine-dinucleotide: G8 (= G9), N10 (≠ G11), S11 (≠ K12), G12 (≠ R13), I13 (= I14), D32 (≠ Y33), I33 (≠ R34), I53 (≠ C53), D54 (= D54), L55 (≠ F55), A81 (= A81), A82 (≠ S82), G83 (≠ D83), I84 (≠ L85), V104 (= V104), I132 (= I136), A133 (≠ T137), S134 (≠ D138), Y147 (= Y151), K151 (= K155), P177 (= P180), G178 (≠ A181), V179 (≠ M182), I180 (= I183), T182 (≠ F185), E183 (≠ N186), L184 (≠ P187), T185 (≠ S188)
5l42A Leishmania major pteridine reductase 1 (ptr1) in complex with compound 3 (see paper)
24% identity, 99% coverage: 2:238/239 of query aligns to 1:262/265 of 5l42A
- active site: R13 (= R13), D158 (= D138), Y171 (= Y151)
- binding (2~{R})-2-[3,4-bis(oxidanyl)phenyl]-6-oxidanyl-2,3-dihydrochromen-4-one: S100 (≠ P90), F102 (= F92), L165 (≠ S145), Y171 (= Y151), G202 (≠ A181), L203 (≠ M182), H218 (≠ Y193), Y260 (≠ R236)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G9 (= G9), K12 (= K12), R13 (= R13), L14 (≠ I14), H32 (≠ T32), Y33 (= Y33), H34 (≠ Y37), R35 (≠ P38), S36 (= S39), A60 (≠ C53), D61 (= D54), L62 (≠ F55), S63 (≠ Y56), N98 (= N88), A99 (≠ S89), S100 (≠ P90), S101 (≠ E91), D119 (vs. gap), S123 (≠ V104), M156 (≠ I136), V157 (≠ T137), D158 (= D138), Y171 (= Y151), K175 (= K155), P201 (= P180), G202 (≠ A181), L203 (≠ M182), S204 (≠ I183)
4bo8A Crystal structure of 3-oxoacyl-(acyl-carrier-protein) reductase (fabg) from pseudomonas aeruginosa in complex with 1-(2-amino-4-phenylimidazol-1-yl)-3-(2-fluorophenyl) urea at 2.7a resolution (see paper)
26% identity, 97% coverage: 6:238/239 of query aligns to 11:235/236 of 4bo8A
- active site: G18 (≠ R13), S130 (≠ D138), Y143 (= Y151), K147 (= K155)
- binding 1-(2-amino-4-phenylimidazol-1-yl)-3-(2-fluorophenyl)urea: W95 (= W84), V99 (≠ I102), N100 (≠ Q103), L103 (≠ V106), A145 (= A153), G149 (≠ A157), G152 (≠ N160), F153 (≠ L161)
7pxxA The crystal structure of leishmania major pteridine reductase 1 in complex with substrate folic acid (see paper)
24% identity, 99% coverage: 2:238/239 of query aligns to 1:261/264 of 7pxxA
- binding folic acid: R13 (= R13), S100 (≠ P90), F102 (= F92), L164 (≠ S145), Y167 (≠ H148), Y170 (= Y151), L202 (≠ M182), D208 (vs. gap), H217 (≠ Y193)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G9 (= G9), R13 (= R13), L14 (≠ I14), H32 (≠ T32), Y33 (= Y33), H34 (≠ Y37), R35 (≠ P38), S36 (= S39), A60 (≠ C53), D61 (= D54), L62 (≠ F55), S63 (≠ Y56), N98 (= N88), A99 (≠ S89), S100 (≠ P90), S101 (≠ E91), D118 (vs. gap), S122 (vs. gap), M155 (≠ I136), V156 (≠ T137), D157 (= D138), Y170 (= Y151), K174 (= K155), P200 (= P180), G201 (≠ A181), L202 (≠ M182), S203 (≠ I183)
2qhxA Structure of pteridine reductase from leishmania major complexed with a ligand (see paper)
24% identity, 99% coverage: 2:238/239 of query aligns to 1:261/264 of 2qhxA
- active site: R13 (= R13), R35 (≠ P38), N41 (≠ Q44), N97 (≠ D87), D157 (= D138), Q162 (≠ K143), Y170 (= Y151)
- binding methyl 1-(4-{[(2,4-diaminopteridin-6-yl)methyl](methyl)amino}benzoyl)piperidine-4-carboxylate: R13 (= R13), S100 (≠ P90), S101 (≠ E91), F102 (= F92), L164 (≠ S145), Y170 (= Y151), L202 (≠ M182), L205 (≠ F185), D208 (vs. gap), M209 (vs. gap), H217 (≠ Y193)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G9 (= G9), R13 (= R13), L14 (≠ I14), H32 (≠ T32), Y33 (= Y33), H34 (≠ Y37), R35 (≠ P38), S36 (= S39), A60 (≠ C53), D61 (= D54), L62 (≠ F55), S63 (≠ Y56), N98 (= N88), A99 (≠ S89), S100 (≠ P90), S101 (≠ E91), D118 (vs. gap), S122 (vs. gap), M155 (≠ I136), V156 (≠ T137), D157 (= D138), Y170 (= Y151), K174 (= K155), P200 (= P180), G201 (≠ A181), L202 (≠ M182), S203 (≠ I183)
1mxfA Crystal structure of inhibitor complex of putative pteridine reductase 2 (ptr2) from trypanosoma cruzi (see paper)
26% identity, 96% coverage: 6:235/239 of query aligns to 5:241/247 of 1mxfA