Comparing 203280 FitnessBrowser__MR1:203280 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
1cevA Arginase from bacillus caldovelox, native structure at ph 5.6 (see paper)
27% identity, 69% coverage: 47:234/271 of query aligns to 70:261/299 of 1cevA
Sites not aligning to the query:
P53608 Arginase; EC 3.5.3.1 from Bacillus caldovelox (see paper)
27% identity, 69% coverage: 47:234/271 of query aligns to 70:261/299 of P53608
Sites not aligning to the query:
5cevA Arginase from bacillus caldevelox, l-lysine complex (see paper)
27% identity, 69% coverage: 47:234/271 of query aligns to 69:260/298 of 5cevA
Sites not aligning to the query:
4cevA Arginase from bacillus caldevelox, l-ornithine complex (see paper)
27% identity, 69% coverage: 47:234/271 of query aligns to 69:260/298 of 4cevA
Sites not aligning to the query:
3cevA Arginase from bacillus caldevelox, complexed with l-arginine (see paper)
27% identity, 69% coverage: 47:234/271 of query aligns to 69:260/298 of 3cevA
Sites not aligning to the query:
2cevB Arginase from bacillus caldevelox, native structure at ph 8.5 (see paper)
27% identity, 69% coverage: 47:234/271 of query aligns to 69:260/298 of 2cevB
Sites not aligning to the query:
4mynA Crystal structure of trypanosoma cruzi formiminoglutamase n114h variant with mn2+2 (see paper)
23% identity, 81% coverage: 21:240/271 of query aligns to 54:276/298 of 4mynA
>203280 FitnessBrowser__MR1:203280
MRQWLNLQSNRFLSGTECLILGQVHTADLQLQVKTDEGASLTALRAAVEQLDERVINIVR
AILDAGLEPILIGGGHNNAYGLLMAASAHYQRQVAAVNLDPHSDFRLLEGRHSGNGFSYA
ADRGALGYYHVLGLHELKNSEANLQQLTEFGGTWHSLQQIWIRREISLTQALQEIADKLN
QTALPVALELDVDAIAKMPSSASTAAGIPLLDAAHYISYIASHCPCAYLHLAEAAPSCHE
AGIEAGFRDVGQSISELIYAYVQARRQFLAQ
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory