SitesBLAST
Comparing AO353_21365 FitnessBrowser__pseudo3_N2E3:AO353_21365 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3nt5A Crystal structure of myo-inositol dehydrogenase from bacillus subtilis with bound cofactor and product inosose (see paper)
60% identity, 100% coverage: 1:335/336 of query aligns to 1:336/337 of 3nt5A
- active site: K97 (= K97), H176 (= H176)
- binding (2R,3S,4s,5R,6S)-2,3,4,5,6-pentahydroxycyclohexanone: K97 (= K97), H155 (= H155), H176 (= H176), Y235 (= Y235)
- binding nicotinamide-adenine-dinucleotide: G9 (= G9), G11 (= G11), A12 (= A12), I13 (= I13), D35 (= D35), V36 (≠ I36), S74 (= S74), W75 (= W75), G76 (= G76), E96 (= E96), K97 (= K97), Y280 (= Y280)
3nt4A Crystal structure of myo-inositol dehydrogenase from bacillus subtilis with bound cofactor nadh and inositol (see paper)
60% identity, 100% coverage: 1:335/336 of query aligns to 1:336/337 of 3nt4A
- active site: K97 (= K97), H176 (= H176)
- binding 1,2,3,4,5,6-hexahydroxy-cyclohexane: H155 (= H155), H176 (= H176), Y235 (= Y235), W272 (= W272)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G11 (= G11), A12 (= A12), I13 (= I13), D35 (= D35), V36 (≠ I36), S74 (= S74), W75 (= W75), G76 (= G76), E96 (= E96), K97 (= K97), H176 (= H176)
3nt2B Crystal structure of myo-inositol dehydrogenase from bacillus subtilis with bound cofactor (see paper)
60% identity, 100% coverage: 1:335/336 of query aligns to 1:336/337 of 3nt2B
- active site: K97 (= K97), H176 (= H176)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G9 (= G9), G11 (= G11), A12 (= A12), D35 (= D35), V36 (≠ I36), S74 (= S74), W75 (= W75), A78 (≠ S78), K97 (= K97), W272 (= W272), Y280 (= Y280)
3nt2A Crystal structure of myo-inositol dehydrogenase from bacillus subtilis with bound cofactor (see paper)
60% identity, 100% coverage: 1:335/336 of query aligns to 1:336/337 of 3nt2A
- active site: K97 (= K97), H176 (= H176)
- binding nicotinamide-adenine-dinucleotide: G9 (= G9), G11 (= G11), A12 (= A12), I13 (= I13), D35 (= D35), V36 (≠ I36), S74 (= S74), W75 (= W75), G76 (= G76), A78 (≠ S78), H79 (= H79), E96 (= E96), K97 (= K97), H176 (= H176), Y280 (= Y280)
4l8vA Crystal structure of a12k/d35s mutant myo-inositol dehydrogenase from bacillus subtilis with bound cofactor NADP (see paper)
60% identity, 100% coverage: 1:335/336 of query aligns to 1:336/337 of 4l8vA
- active site: K97 (= K97), H176 (= H176)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: K12 (≠ A12), I13 (= I13), S74 (= S74), W75 (= W75), H79 (= H79), E96 (= E96), K97 (= K97), M126 (= M126), W272 (= W272), Y280 (= Y280)
3ec7A Crystal structure of putative dehydrogenase from salmonella typhimurium lt2
51% identity, 100% coverage: 1:335/336 of query aligns to 1:335/336 of 3ec7A
- active site: K97 (= K97), H176 (= H176)
- binding nicotinamide-adenine-dinucleotide: G11 (= G11), M12 (≠ A12), I13 (= I13), D35 (= D35), I36 (= I36), R40 (≠ Q40), T73 (= T73), A74 (≠ S74), S75 (≠ W75), N76 (≠ G76), H79 (= H79), E96 (= E96), K97 (= K97), M126 (= M126), W271 (= W272), Y279 (= Y280)
4mjlD Crystal structure of myo-inositol dehydrogenase from lactobacillus casei in complex with NAD and d-chiro-inositol
47% identity, 100% coverage: 1:335/336 of query aligns to 1:338/339 of 4mjlD
- active site: K97 (= K97)
- binding (1r,2r,3s,4s,5s,6s)-cyclohexane-1,2,3,4,5,6-hexol: K97 (= K97), H155 (= H155), N157 (= N157), D172 (= D172), T173 (= T173), H176 (= H176), Y236 (= Y235)
- binding nicotinamide-adenine-dinucleotide: G11 (= G11), A12 (= A12), M13 (≠ I13), D35 (= D35), I36 (= I36), V73 (≠ T73), S74 (= S74), H79 (= H79), E96 (= E96), K97 (= K97), M126 (= M126), D172 (= D172), W274 (= W272), Y282 (= Y280)
4mioD Crystal structure of myo-inositol dehydrogenase from lactobacillus casei in complex with NAD(h) and myo-inositol
47% identity, 100% coverage: 1:335/336 of query aligns to 1:338/339 of 4mioD
- active site: K97 (= K97)
- binding 1,2,3,4,5,6-hexahydroxy-cyclohexane: K97 (= K97), H155 (= H155), N157 (= N157), D172 (= D172), T173 (= T173), H176 (= H176), Y236 (= Y235)
- binding 1,4-dihydronicotinamide adenine dinucleotide: A12 (= A12), M13 (≠ I13), D35 (= D35), I36 (= I36), S74 (= S74), A78 (≠ S78), H79 (= H79), E96 (= E96), K97 (= K97), M126 (= M126), D172 (= D172), W274 (= W272), Y282 (= Y280)
4mioA Crystal structure of myo-inositol dehydrogenase from lactobacillus casei in complex with NAD(h) and myo-inositol
47% identity, 100% coverage: 1:335/336 of query aligns to 1:338/339 of 4mioA
- active site: K97 (= K97)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G11 (= G11), A12 (= A12), M13 (≠ I13), D35 (= D35), I36 (= I36), S74 (= S74), F75 (≠ W75), H79 (= H79), E96 (= E96), K97 (= K97), W274 (= W272), Y282 (= Y280)
4minA Crystal structure of myo-inositol dehydrogenase from lactobacillus casei with bound cofactor NAD
47% identity, 100% coverage: 1:335/336 of query aligns to 1:338/339 of 4minA
- active site: K97 (= K97)
- binding nicotinamide-adenine-dinucleotide: G11 (= G11), A12 (= A12), M13 (≠ I13), D35 (= D35), I36 (= I36), V73 (≠ T73), S74 (= S74), F75 (≠ W75), H79 (= H79), E96 (= E96), K97 (= K97), Y282 (= Y280)
4n54A Crystal structure of scyllo-inositol dehydrogenase from lactobacillus casei with bound cofactor NAD(h) and scyllo-inositol
26% identity, 97% coverage: 2:327/336 of query aligns to 2:339/340 of 4n54A
- active site: K96 (= K97), H183 (= H176)
- binding (1r,2r,3r,4r,5r,6r)-cyclohexane-1,2,3,4,5,6-hexol: R12 (≠ A12), K96 (= K97), D156 (≠ N157), D179 (= D172), M180 (≠ T173), H183 (= H176), R238 (≠ K219), Y244 (= Y235)
- binding 1,4-dihydronicotinamide adenine dinucleotide: V8 (≠ I8), G9 (= G9), L10 (≠ T10), G11 (= G11), R12 (≠ A12), L13 (≠ I13), S35 (≠ D35), V36 (≠ I36), E40 (≠ N37), S73 (= S74), P74 (≠ W75), F77 (≠ S78), H78 (= H79), E95 (= E96), K96 (= K97), M125 (= M126), F167 (≠ M168), F284 (≠ W272)
3ceaA Crystal structure of myo-inositol 2-dehydrogenase (np_786804.1) from lactobacillus plantarum at 2.40 a resolution
26% identity, 97% coverage: 3:328/336 of query aligns to 5:342/342 of 3ceaA
- active site: K98 (= K97), H185 (= H176)
- binding nicotinamide-adenine-dinucleotide: G11 (= G9), G13 (= G11), R14 (≠ A12), L15 (≠ I13), L38 (≠ T34), Q42 (≠ L38), V74 (≠ T73), A75 (≠ S74), P76 (≠ W75), T77 (≠ G76), F79 (≠ S78), H80 (= H79), M83 (≠ F82), E97 (= E96), K98 (= K97), M127 (= M126), F169 (≠ M168), H185 (= H176), F286 (≠ W272)
7xr9A Crystal structure of dgpa with glucose (see paper)
31% identity, 48% coverage: 35:196/336 of query aligns to 29:200/344 of 7xr9A
- binding beta-D-glucopyranose: K91 (= K97), R150 (≠ H155), W157 (≠ V160), F160 (vs. gap), D173 (= D172), H177 (= H176)
- binding nicotinamide-adenine-dinucleotide: D51 (= D57), Y52 (≠ G58), C67 (≠ T73), T68 (≠ S74), P69 (≠ W75), H73 (= H79), E90 (= E96), K91 (= K97), P92 (= P98), Q119 (≠ M126), V159 (vs. gap), F160 (vs. gap), Q166 (≠ K165)
Sites not aligning to the query:
7xreC Crystal structure of dgpa
30% identity, 50% coverage: 28:196/336 of query aligns to 31:210/363 of 7xreC
- binding nicotinamide-adenine-dinucleotide: D38 (= D35), I39 (= I36), T78 (≠ S74), P79 (≠ W75), N80 (≠ G76), H83 (= H79), E100 (= E96), K101 (= K97), P102 (= P98), F170 (vs. gap), Q176 (≠ K165), H187 (= H176)
Sites not aligning to the query:
2glxA Crystal structure analysis of bacterial 1,5-af reductase (see paper)
35% identity, 38% coverage: 61:188/336 of query aligns to 57:191/332 of 2glxA
- active site: K93 (= K97), H179 (= H176)
- binding acetate ion: K93 (= K97), H179 (= H176)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: S69 (≠ T73), T70 (≠ S74), N72 (≠ G76), H75 (= H79), E92 (= E96), K93 (= K97), H121 (≠ F125), W161 (≠ Y164), R162 (≠ K165)
Sites not aligning to the query:
Q2I8V6 1,5-anhydro-D-fructose reductase; Anhydrofructose reductase; 1,5-anhydro-D-fructose reductase (1,5-anhydro-D-mannitol-forming); EC 1.1.1.292 from Ensifer adhaerens (Sinorhizobium morelense) (see paper)
35% identity, 38% coverage: 61:188/336 of query aligns to 58:192/333 of Q2I8V6
- TTNELH 71:76 (≠ SWGPSH 74:79) binding
- EK 93:94 (= EK 96:97) binding
- K94 (= K97) mutation to G: Less than 1% remaining activity.
- N120 (≠ V123) binding
- WR 162:163 (≠ YK 164:165) binding
- D176 (= D172) mutation to A: Less than 1% remaining activity.
- H180 (= H176) mutation to A: Less than 2% remaining activity.
Sites not aligning to the query:
- 9:12 binding
- 10 S→G: Almost no effect.
- 13 A→G: Can use NAD as cosubstrate as well as NADP.
- 33 S→D: No activity.
- 33:34 binding
- 38 binding
- 206 G→I: No effect.
- 283 binding
6jw6A The crystal structure of kand2 in complex with NAD (see paper)
27% identity, 73% coverage: 3:246/336 of query aligns to 2:247/341 of 6jw6A
- binding nicotinamide-adenine-dinucleotide: G10 (= G11), F11 (≠ A12), M12 (≠ I13), D33 (= D35), L34 (≠ I36), T70 (= T73), T71 (≠ S74), P72 (≠ W75), N73 (≠ G76), L75 (≠ S78), H76 (= H79), Q79 (≠ F82), E93 (= E96), K94 (= K97), N122 (≠ F125), W161 (≠ E162), H179 (= H176)
Sites not aligning to the query:
6jw8A The crystal structure of kand2 in complex with nadh and 3"-deamino-3"- hydroxykanamycin b (see paper)
27% identity, 73% coverage: 3:246/336 of query aligns to 2:247/342 of 6jw8A
- binding (2S,3R,4S,5S,6R)-2-[(1S,2S,3R,4S,6R)-3-[(2R,3R,4R,5S,6R)-6-(aminomethyl)-3-azanyl-4,5-bis(oxidanyl)oxan-2-yl]oxy-4,6-bis(azanyl)-2-oxidanyl-cyclohexyl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol: F11 (≠ A12), F152 (≠ H155), N154 (= N157), D175 (= D172), L176 (≠ T173), H179 (= H176), E236 (≠ Y235)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G10 (= G11), F11 (≠ A12), M12 (≠ I13), D33 (= D35), L34 (≠ I36), T70 (= T73), T71 (≠ S74), P72 (≠ W75), N73 (≠ G76), L75 (≠ S78), H76 (= H79), Q79 (≠ F82), E93 (= E96), K94 (= K97), N122 (≠ F125), W161 (≠ E162), H179 (= H176)
Sites not aligning to the query:
- binding (2S,3R,4S,5S,6R)-2-[(1S,2S,3R,4S,6R)-3-[(2R,3R,4R,5S,6R)-6-(aminomethyl)-3-azanyl-4,5-bis(oxidanyl)oxan-2-yl]oxy-4,6-bis(azanyl)-2-oxidanyl-cyclohexyl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol: 271
- binding 1,4-dihydronicotinamide adenine dinucleotide: 290
6jw7A The crystal structure of kand2 in complex with nadh and 3"-deamino-3"- hydroxykanamycin a (see paper)
27% identity, 73% coverage: 3:246/336 of query aligns to 2:247/342 of 6jw7A
- binding (2R,3S,4S,5R,6R)-2-(aminomethyl)-6-[(1R,2S,3S,4R,6S)-4,6-bis(azanyl)-3-[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2-oxidanyl-cyclohexyl]oxy-oxane-3,4,5-triol: F11 (≠ A12), N154 (= N157), D175 (= D172), H179 (= H176), E236 (≠ Y235)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G8 (= G9), G10 (= G11), F11 (≠ A12), M12 (≠ I13), D33 (= D35), L34 (≠ I36), T70 (= T73), T71 (≠ S74), P72 (≠ W75), N73 (≠ G76), L75 (≠ S78), H76 (= H79), Q79 (≠ F82), E93 (= E96), K94 (= K97), N122 (≠ F125), W161 (≠ E162)
Sites not aligning to the query:
- binding (2R,3S,4S,5R,6R)-2-(aminomethyl)-6-[(1R,2S,3S,4R,6S)-4,6-bis(azanyl)-3-[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2-oxidanyl-cyclohexyl]oxy-oxane-3,4,5-triol: 271
- binding 1,4-dihydronicotinamide adenine dinucleotide: 290
3e18A Crystal structure of NAD-binding protein from listeria innocua
26% identity, 77% coverage: 4:261/336 of query aligns to 5:277/348 of 3e18A
- active site: K94 (= K97), H178 (= H176)
- binding nicotinamide-adenine-dinucleotide: G12 (= G11), G13 (≠ A12), M14 (≠ I13), F34 (≠ T34), D35 (= D35), I36 (= I36), K40 (= K43), A70 (≠ T73), T71 (≠ S74), P72 (≠ W75), N73 (≠ G76), H76 (= H79), E93 (= E96), K94 (= K97), N122 (vs. gap), W161 (≠ G161), R162 (≠ E162), H178 (= H176)
Query Sequence
>AO353_21365 FitnessBrowser__pseudo3_N2E3:AO353_21365
MSLKLGVIGTGAIGQDHIRRCSQTLLNSQVVAVTDINLQQAAKVVADLKLTAEVYPDGHA
LIKAPDVEAILVTSWGPSHEEFVLAAIAAGKPVFCEKPLAVTAEGCRKIVEAEVAHGKRL
VQVGFMRPYDEGYRALKAVIDSGQIGEPLMLHCAHRNPTVGENYKTDMAITDTLIHELDV
LRWLLDDDYVSVQVVFPRKTSKAHAHLKDPQIVLLETAKGTRIDVEVFVNCQYGYDIQCE
VVGETGIAKLPEPSQVQMRSGAKLSNAILMDWKDRFIAAYDVELQAFIDGVRAGQVGGPS
AWDGFAAAVAADACIEAQQSGAIVNVALPDRPRFYG
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory