Comparing AO353_25210 FitnessBrowser__pseudo3_N2E3:AO353_25210 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
P00926 D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Escherichia coli (strain K12) (see paper)
63% identity, 98% coverage: 2:443/450 of query aligns to 1:442/442 of P00926
3ss7X Crystal structure of holo d-serine dehydratase from escherichia coli at 1.55 a resolution (see paper)
64% identity, 97% coverage: 7:443/450 of query aligns to 1:437/437 of 3ss7X
3r0xA Crystal structure of selenomethionine incorporated apo d-serine deaminase from salmonella tyhimurium (see paper)
64% identity, 95% coverage: 14:441/450 of query aligns to 11:438/438 of 3r0xA
>AO353_25210 FitnessBrowser__pseudo3_N2E3:AO353_25210
MIQGKTLDAWYESHPIIKELVSLQEITWFNPAIASVSIALGDVGLNHNDVKDASERLRRF
APYIAKVFPETAAADGIIESGIQPLKKFQQRLLSEAGLPGVGSLWLKKDSDLPISGSIKA
RGGIHEVLKHAEDLALQAGLIKLDDNYEALASDSALEFFSRYKIAVGSTGNLGLSIGIMS
AKLGFQATVHMSSDARQWKKDKLRASGVTVVEYESDYSVAVENGRLQAEKDPACYFIDDE
NSPHLFLGYAVAAERLARQFEFAGVRVDADHPLFVYLPCGVGGGPGGVAFGLKLAFGDAV
HCVFAEPTHSPCMMLGVYTGLHDEVSVQEFGIDNVTAADGLAVGRPSGFVGKAMQRLIDG
YYTVTDEELYRLMFLAHELENVKLEPSALAGAPGVVRVLNDEKYLERIGVSTAKLANATH
LIWGTGGSMVPAAEFATYLDKGRALQHPAQ
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory