Comparing BWI76_RS26550 FitnessBrowser__Koxy:BWI76_RS26550 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
Q9FMF7 Dicarboxylate transporter 2.1, chloroplastic; AtpDCT1; Glutamate/malate translocator from Arabidopsis thaliana (Mouse-ear cress) (see paper)
34% identity, 99% coverage: 5:464/464 of query aligns to 95:562/563 of Q9FMF7
>BWI76_RS26550 FitnessBrowser__Koxy:BWI76_RS26550
MLYLKLLPIIFFPVLFWIIPHPEGVAAPTWHMVGIYLAMLCGLVLRPFTDAVIMLIILGF
ASLVLDPAPLFAGFGSPMVWFIISAFIICKAFVITGLGKRIAYLLLKRYGKNTLTLGYLM
MVTDTVLAPATGSNMSRSGGITYPIFRNIAEALGSKPDDGSRKIGAYLTILMYVVSMGTS
SLFLTGMATNSITVSLANEIMKVNLEWMTWFKAAVVPAGLVLLLAPWILYKIYAPELKVI
DNVNEIAEKGLCELGPVKREEKLLIVFFILGVLGWMTGSITGIAFIPVGLAFLACLLLFG
VLSWNDVVSEKSAWQTFVWYGAFYGCAVALSKGGFYVFLVDVIKNYLDLSHLNEISAIAV
LVFISLAVRYFFVSNSAFVVSFYPVLFTLGMTTQAHPMYVALSLAFSAGYGALLTHYGNG
AGVFTFSSGYVPQKTFWMLGTIMVVVNVLIFFLIGIPYWKFIGI
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory