SitesBLAST – Find functional sites

 

SitesBLAST

Comparing CA265_RS13790 FitnessBrowser__Pedo557:CA265_RS13790 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 5 hits to proteins with known functional sites (download)

2qlxA Crystal structure of rhamnose mutarotase rhau of rhizobium leguminosarum in complex with l-rhamnose (see paper)
56% identity, 98% coverage: 2:101/102 of query aligns to 7:107/108 of 2qlxA

query
sites
2qlxA
K
 
K
I
 
H
A
 
A
F
 
F
K
 
K
M
|
M
K
 
Q
L
 
L
K
 
N
P
 
P
G
 
G
F
 
M
E
 
E
T
 
A
E
 
E
Y
|
Y
K
 
R
K
 
K
R
 
R
H
|
H
D
 
D
E
 
E
I
 
I
W
 
W
P
 
P
E
 
E
L
 
L
S
 
V
T
 
D
L
 
L
L
 
L
K
 
H
E
 
Q
N
 
S
G
 
G
I
 
A
S
 
S
D
 
D
Y
|
Y
S
 
S
I
 
I
F
 
H
L
 
L
D
 
D
E
 
R
E
 
E
T
 
T
N
 
N
T
 
T
L
 
L
F
 
F
A
 
G
V
 
V
-
 
L
Q
 
T
Q
 
R
Q
 
P
N
 
K
G
 
D
S
 
H
S
 
T
S
 
M
Q
 
A
D
 
S
L
 
L
G
 
P
S
 
D
T
 
H
R
 
P
I
 
V
V
 
M
Q
 
K
K
 
K
W
|
W
W
|
W
A
 
A
Y
 
H
M
 
M
A
 
A
D
 
D
I
 
I
M
 
M
E
 
A
T
 
T
N
 
N
A
 
P
D
 
D
N
 
N
S
 
S
P
 
P
K
 
V
T
 
Q
F
 
S
P
 
D
L
 
L
E
 
V
M
 
T
V
 
L
F
 
F
H
 
H
L
 
M

2qlwB Crystal structure of rhamnose mutarotase rhau of rhizobium leguminosarum (see paper)
56% identity, 98% coverage: 2:101/102 of query aligns to 7:107/108 of 2qlwB

query
sites
2qlwB
K
 
K
I
 
H
A
 
A
F
 
F
K
 
K
M
 
M
K
 
Q
L
 
L
K
 
N
P
 
P
G
 
G
F
 
M
E
 
E
T
 
A
E
 
E
Y
 
Y
K
 
R
K
 
K
R
 
R
H
 
H
D
 
D
E
 
E
I
 
I
W
 
W
P
 
P
E
 
E
L
 
L
S
 
V
T
 
D
L
 
L
L
 
L
K
 
H
E
 
Q
N
 
S
G
 
G
I
 
A
S
 
S
D
 
D
Y
 
Y
S
 
S
I
 
I
F
 
H
L
 
L
D
 
D
E
 
R
E
 
E
T
 
T
N
 
N
T
 
T
L
 
L
F
 
F
A
 
G
V
 
V
-
 
L
Q
 
T
Q
 
R
Q
 
P
N
 
K
G
 
D
S
 
H
S
 
T
S
 
M
Q
 
A
D
 
S
L
 
L
G
 
P
S
 
D
T
 
H
R
 
P
I
 
V
V
 
M
Q
 
K
K
 
K
W
 
W
W
 
W
A
 
A
Y
 
H
M
 
M
A
|
A
D
 
D
I
 
I
M
|
M
E
 
A
T
|
T
N
 
N
A
 
P
D
 
D
N
 
N
S
 
S
P
 
P
K
 
V
T
 
Q
F
 
S
P
 
D
L
 
L
E
 
V
M
 
T
V
 
L
F
 
F
H
 
H
L
 
M

1x8dA Crystal structure of e. Coli yiil protein containing l-rhamnose (see paper)
42% identity, 99% coverage: 1:101/102 of query aligns to 2:103/104 of 1x8dA

query
sites
1x8dA
M
 
I
K
 
R
I
 
K
A
 
A
F
 
F
K
 
V
M
 
M
K
 
Q
L
 
V
K
 
N
P
 
P
G
 
D
F
 
A
E
 
H
T
 
E
E
 
E
Y
|
Y
K
 
Q
K
 
R
R
 
R
H
|
H
D
 
N
E
 
P
I
 
I
W
 
W
P
 
P
E
 
E
L
 
L
S
 
E
T
 
A
L
 
V
L
 
L
K
 
K
E
 
S
N
 
H
G
 
G
I
 
A
S
 
H
D
 
N
Y
|
Y
S
 
A
I
 
I
F
 
Y
L
 
L
D
 
D
E
 
K
E
 
A
T
 
R
N
 
N
T
 
L
L
 
L
F
 
F
A
 
A
-
 
M
V
 
V
Q
 
E
Q
 
I
Q
 
E
N
 
S
G
 
E
S
 
E
S
 
R
S
 
W
Q
 
N
D
 
A
L
 
V
G
 
A
S
 
S
T
 
T
R
 
D
I
 
V
V
 
C
Q
 
Q
K
 
R
W
|
W
W
|
W
A
 
K
Y
 
Y
M
 
M
A
 
T
D
 
D
I
 
V
M
 
M
E
 
P
T
 
A
N
 
N
A
 
P
D
 
D
N
 
N
S
 
S
P
 
P
K
 
V
T
 
S
F
 
S
P
 
E
L
 
L
E
 
Q
M
 
E
V
 
V
F
 
F
H
 
Y
L
 
L

P32156 L-rhamnose mutarotase; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Escherichia coli (strain K12) (see paper)
42% identity, 99% coverage: 1:101/102 of query aligns to 2:103/104 of P32156

query
sites
P32156
M
 
I
K
 
R
I
 
K
A
 
A
F
 
F
K
 
V
M
 
M
K
 
Q
L
 
V
K
 
N
P
 
P
G
 
D
F
 
A
E
 
H
T
 
E
E
 
E
Y
|
Y
K
 
Q
K
 
R
R
 
R
H
 
H
D
 
N
E
 
P
I
 
I
W
 
W
P
 
P
E
 
E
L
 
L
S
 
E
T
 
A
L
 
V
L
 
L
K
 
K
E
 
S
N
 
H
G
 
G
I
 
A
S
 
H
D
 
N
Y
 
Y
S
 
A
I
 
I
F
 
Y
L
 
L
D
 
D
E
 
K
E
 
A
T
 
R
N
 
N
T
 
L
L
 
L
F
 
F
A
 
A
-
 
M
V
 
V
Q
 
E
Q
 
I
Q
 
E
N
 
S
G
 
E
S
 
E
S
 
R
S
 
W
Q
 
N
D
 
A
L
 
V
G
 
A
S
 
S
T
 
T
R
 
D
I
 
V
V
 
C
Q
 
Q
K
 
R
W
 
W
W
 
W
A
 
K
Y
 
Y
M
 
M
A
 
T
D
 
D
I
 
V
M
 
M
E
 
P
T
 
A
N
 
N
A
 
P
D
 
D
N
 
N
S
 
S
P
 
P
K
 
V
T
 
S
F
 
S
P
 
E
L
 
L
E
 
Q
M
 
E
V
 
V
F
 
F
H
 
Y
L
 
L

7bywA Crystal structure of acidovorax avenae l-fucose mutarotase (l-fucose- bound form) (see paper)
28% identity, 99% coverage: 2:102/102 of query aligns to 2:108/108 of 7bywA

query
sites
7bywA
K
 
R
I
 
M
A
 
G
F
 
M
K
 
V
M
 
I
K
 
G
L
 
I
K
 
K
P
 
P
G
 
E
F
 
H
E
 
I
T
 
D
E
 
E
Y
|
Y
K
 
K
K
 
R
R
 
L
H
|
H
D
 
A
E
 
A
I
 
V
W
 
W
P
 
P
E
 
A
L
 
V
S
 
L
T
 
A
L
 
R
L
 
L
K
 
A
E
 
E
N
 
A
G
 
H
I
 
V
S
 
R
D
 
N
Y
|
Y
S
 
S
I
 
I
F
 
F
L
 
L
D
 
R
E
 
E
E
 
P
T
 
E
N
 
N
T
 
L
L
 
L
F
 
F
A
 
G
V
 
Y
Q
 
W
Q
 
E
Q
 
Y
N
 
H
G
 
G
-
 
T
-
 
D
-
 
Y
-
 
A
S
 
A
S
 
D
S
 
M
Q
 
E
D
 
A
L
 
I
G
 
A
S
 
Q
T
 
D
R
 
P
I
 
E
V
 
T
Q
 
R
K
 
R
W
|
W
W
|
W
A
 
T
Y
 
F
M
 
C
A
 
G
D
 
P
I
 
C
M
 
Q
E
 
E
T
 
P
N
 
L
A
 
A
D
 
S
N
 
R
S
 
Q
P
 
P
K
 
G
T
 
E
F
 
H
-
 
W
-
 
A
P
 
H
L
 
M
E
 
E
M
 
E
V
 
V
F
 
F
H
 
H
L
 
V
D
 
D

Query Sequence

>CA265_RS13790 FitnessBrowser__Pedo557:CA265_RS13790
MKIAFKMKLKPGFETEYKKRHDEIWPELSTLLKENGISDYSIFLDEETNTLFAVQQQNGS
SSQDLGSTRIVQKWWAYMADIMETNADNSPKTFPLEMVFHLD

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory