SitesBLAST
Comparing GFF878 FitnessBrowser__Marino:GFF878 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6yu6B Crystal structure of mhst in complex with l-leucine (see paper)
45% identity, 96% coverage: 15:456/460 of query aligns to 5:438/446 of 6yu6B
- binding leucine: S18 (= S28), A19 (= A29), G21 (= G31), L22 (= L32), G23 (= G33), N24 (= N34), Y101 (= Y115), F223 (= F236), T224 (= T237), S226 (= S239), M229 (≠ I242), S317 (= S330), L321 (≠ M334)
6yu5A Crystal structure of mhst in complex with l-valine (see paper)
45% identity, 97% coverage: 12:456/460 of query aligns to 2:438/441 of 6yu5A
- binding valine: S18 (= S28), A19 (= A29), G21 (= G31), L22 (= L32), G23 (= G33), N24 (= N34), Y101 (= Y115), F223 (= F236), T224 (= T237), S226 (= S239), S317 (= S330), L321 (≠ M334)
6yu3A Crystal structure of mhst in complex with l-phenylalanine (see paper)
45% identity, 97% coverage: 12:456/460 of query aligns to 2:438/441 of 6yu3A
- binding phenylalanine: S18 (= S28), A19 (= A29), G21 (= G31), L22 (= L32), G23 (= G33), N24 (= N34), Y101 (= Y115), F223 (= F236), T224 (= T237), S226 (= S239), M229 (≠ I242), S317 (= S330), S320 (= S333), L321 (≠ M334)
6yu2A Crystal structure of mhst in complex with l-isoleucine (see paper)
45% identity, 97% coverage: 12:456/460 of query aligns to 2:438/441 of 6yu2A
- binding isoleucine: S18 (= S28), A19 (= A29), G21 (= G31), L22 (= L32), G23 (= G33), Y101 (= Y115), F223 (= F236), T224 (= T237), S226 (= S239), M229 (≠ I242), S317 (= S330), L321 (≠ M334)
4us3A Crystal structure of the bacterial nss member mhst in an occluded inward-facing state (see paper)
45% identity, 97% coverage: 12:456/460 of query aligns to 2:438/441 of 4us3A
- binding sodium ion: G17 (= G27), S18 (= S28), A19 (= A29), V20 (= V30), V20 (= V30), G21 (= G31), N24 (= N34), T224 (= T237), D256 (= D269), A313 (= A326), S316 (≠ T329), S317 (= S330)
- binding tryptophan: S18 (= S28), A19 (= A29), G21 (= G31), L22 (= L32), G23 (= G33), N24 (= N34), Y101 (= Y115), F223 (= F236), T224 (= T237), S226 (= S239), L227 (≠ I240), M229 (≠ I242), S317 (= S330), S320 (= S333), L321 (≠ M334)
6yu7A Crystal structure of mhst in complex with l-tyrosine (see paper)
45% identity, 97% coverage: 12:456/460 of query aligns to 2:438/442 of 6yu7A
- binding tyrosine: S18 (= S28), A19 (= A29), G21 (= G31), L22 (= L32), G23 (= G33), N24 (= N34), Y101 (= Y115), F223 (= F236), T224 (= T237), L225 (= L238), S226 (= S239), M229 (≠ I242), A231 (≠ V244), S317 (= S330), S320 (= S333), L321 (≠ M334)
6yu4A Crystal structure of mhst in complex with l-4f-phenylalanine (see paper)
45% identity, 97% coverage: 12:456/460 of query aligns to 2:438/442 of 6yu4A
- binding 4-fluoro-l-phenylalanine: S18 (= S28), A19 (= A29), G21 (= G31), L22 (= L32), G23 (= G33), N24 (= N34), Y101 (= Y115), F223 (= F236), T224 (= T237), S226 (= S239), M229 (≠ I242), A231 (≠ V244), S317 (= S330), S320 (= S333), L321 (≠ M334)
4us4A Crystal structure of the bacterial nss member mhst in an occluded inward-facing state (lipidic cubic phase form) (see paper)
45% identity, 95% coverage: 21:456/460 of query aligns to 2:429/433 of 4us4A
- binding (2s)-2,3-dihydroxypropyl(7z)-pentadec-7-enoate: A173 (= A196), Y177 (= Y200), T180 (≠ N203), I287 (≠ M309), R288 (≠ S310), L289 (≠ G311), I292 (≠ L314), V293 (≠ F315)
- binding (2r)-2,3-dihydroxypropyl(7z)-pentadec-7-enoate: T131 (≠ W154), L132 (≠ E155), L134 (= L157), F135 (≠ M158), I142 (≠ V165)
- binding sodium ion: G8 (= G27), S9 (= S28), A10 (= A29), V11 (= V30), V11 (= V30), G12 (= G31), N15 (= N34), T215 (= T237), D247 (= D269), A304 (= A326), S307 (≠ T329), S308 (= S330)
- binding tryptophan: S9 (= S28), A10 (= A29), G12 (= G31), L13 (= L32), G14 (= G33), N15 (= N34), Y92 (= Y115), F214 (= F236), T215 (= T237), S217 (= S239), L218 (≠ I240), M220 (≠ I242), S308 (= S330), L312 (≠ M334)
3gwwA Leucine transporter leut in complex with s-fluoxetine (see paper)
29% identity, 96% coverage: 15:454/460 of query aligns to 4:454/501 of 3gwwA
- binding leucine: N17 (≠ S28), A18 (= A29), G20 (= G31), L21 (= L32), G22 (= G33), N23 (= N34), Y104 (= Y115), F244 (= F236), T245 (= T237), S247 (= S239), F250 (≠ I242), S346 (= S330), I350 (≠ M334)
- binding (3S)-N-methyl-3-phenyl-3-[4-(trifluoromethyl)phenoxy]propan-1-amine: L21 (= L32), G22 (= G33), L25 (≠ W36), R26 (≠ K37), V29 (≠ Y40), Q30 (≠ I41), Y103 (≠ F114), Y104 (= Y115), I107 (= I118), F244 (= F236), A310 (≠ G294), F311 (≠ P295), D392 (= D394), D395 (= D397)
3f3aA Crystal structure of leut bound to l-tryptophan and sodium (see paper)
30% identity, 96% coverage: 15:454/460 of query aligns to 4:456/504 of 3f3aA