Comparing Ga0059261_0918 FitnessBrowser__Korea:Ga0059261_0918 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
1vrcB Complex of enzyme iiamannose and the histidine-containing phosphocarrier protein hpr from escherichia coli nmr, restrained regularized mean structure (see paper)
35% identity, 89% coverage: 2:121/135 of query aligns to 2:123/129 of 1vrcB
P69797 PTS system mannose-specific EIIAB component; EIIAB-Man; EIII-Man; EC 2.7.1.191 from Escherichia coli (strain K12) (see 4 papers)
35% identity, 89% coverage: 2:121/135 of query aligns to 3:124/323 of P69797
Sites not aligning to the query:
P26379 PTS system fructose-specific EIIA component; EIIA-Fru; Fructose-specific phosphotransferase enzyme IIA component; lev-PTS; p16 from Bacillus subtilis (strain 168) (see paper)
24% identity, 96% coverage: 1:130/135 of query aligns to 1:131/146 of P26379
>Ga0059261_0918 FitnessBrowser__Korea:Ga0059261_0918
MIGLVLVTHGRLAEEFVVAMEHVVGKQERIATISIGPEDDMEGRRSDIAAAITEVDAGRG
VIVLTDLFGGTPSNLAISLMEAGRVEVIAGINLPMLIRLGGARKTMKVTEAVAAAREAGR
KYITVASEVLGEAAA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory