Comparing N515DRAFT_3226 FitnessBrowser__Dyella79:N515DRAFT_3226 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 10 hits to proteins with known functional sites (download)
7kmoA Crystal structure of the gh35 beta-galactosidase (xac1772) from xanthomonas citri in complex with galactose
60% identity, 95% coverage: 26:532/532 of query aligns to 3:510/511 of 7kmoA
6tbjA Structure of a beta galactosidase with inhibitor (see paper)
57% identity, 95% coverage: 26:532/532 of query aligns to 3:522/525 of 6tbjA
6tbgA Structure of a beta galactosidase with inhibitor (see paper)
56% identity, 95% coverage: 26:532/532 of query aligns to 3:532/535 of 6tbgA
6tbfA Structure of a beta galactosidase with inhibitor (see paper)
56% identity, 95% coverage: 26:532/532 of query aligns to 4:535/538 of 6tbfA
6tbhA Structure of a beta galactosidase with inhibitor (see paper)
55% identity, 95% coverage: 26:532/532 of query aligns to 4:536/539 of 6tbhA
8pejA Cjgh35 with a galactosidase activity-based probe (see paper)
56% identity, 95% coverage: 26:532/532 of query aligns to 3:534/537 of 8pejA
6tbiA Structure of a beta galactosidase with inhibitor (see paper)
55% identity, 95% coverage: 26:532/532 of query aligns to 4:537/540 of 6tbiA
4d1jD The structure of the gh35 beta-galactosidase bgl35a from cellvibrio japonicas in complex with 1-deoxygalactonojirimycin (see paper)
55% identity, 95% coverage: 26:532/532 of query aligns to 4:537/540 of 4d1jD
5jawA Structure of a beta galactosidase with inhibitor (see paper)
56% identity, 95% coverage: 26:532/532 of query aligns to 3:534/537 of 5jawA
6tbkA Structure of a beta galactosidase with inhibitor (see paper)
57% identity, 95% coverage: 26:532/532 of query aligns to 3:524/527 of 6tbkA
>N515DRAFT_3226 FitnessBrowser__Dyella79:N515DRAFT_3226
MRRMMRYLAGAWLCLALASPALAEDMPRLVAEHGRHALLVDGKPFLILGAQVNNSSNWPA
MLDEVWPAIGQLHANTVQVPIAWEQIEPKEGQFDFSFLDTLVEQAREHRVRLVLLWFATW
KNNGPSYAPSWVKLDDRRFPRLMNREGRRLNSLSPLASATLEADRKAFVQLMTHLRKIDG
ERHTVIMVQVENESGTYGTDRDHSPMADKVFAGSVPEALLRATGKPAGNWSQVFGNDAAE
FFHAWHVAHFIEQVTAAGKAVYPLPMYANAALRDPFNPGPPGAYESGGPTDNVLHVWKAA
APSLDVLAPDIYKPDYKHYSTYLERYARKDNPLFVAETGNDKVYARYVYAAVGAGAIGWS
PFGMDFTGYSNYPLGARKVDDDTLAMFAANYRVLAPMAGELAAAAYAGKLWGAAEPDDTH
EATLDLGEWQAHLGFGQLQFGTEPPKGNPDHAGGALIAQLAPNEYLVVARDVRVSFSPAH
GRKPDFLLDRVEEGHYDHGRWVFRRLWNGDQTDWGLNFIGEPRVLRVRLATY
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory