Comparing N515DRAFT_3248 FitnessBrowser__Dyella79:N515DRAFT_3248 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3ut0A Crystal structure of exo-1,3/1,4-beta-glucanase (exop) from pseudoalteromonas sp. Bb1 (see paper)
45% identity, 90% coverage: 38:794/838 of query aligns to 3:759/804 of 3ut0A
6jg1A Crystal structure of barley exohydrolasei wildtype in complex with 4i, 4iii,4v-s-trithiocellohexaose (see paper)
42% identity, 71% coverage: 41:635/838 of query aligns to 3:601/606 of 6jg1A
3wlpA Crystal structure analysis of plant exohydrolase (see paper)
43% identity, 70% coverage: 52:635/838 of query aligns to 12:597/602 of 3wlpA
3wljA Crystal structure of barley beta-d-glucan glucohydrolase isoenzyme exo1 in complex with 3-deoxy-glucose (see paper)
43% identity, 70% coverage: 52:635/838 of query aligns to 12:597/602 of 3wljA
1x39A Crystal structure of barley beta-d-glucan glucohydrolase isoenzyme exo1 in complex with gluco-phenylimidazole (see paper)
43% identity, 70% coverage: 52:635/838 of query aligns to 12:597/602 of 1x39A
1x38A Crystal structure of barley beta-d-glucan glucohydrolase isoenzyme exo1 in complex with gluco-phenylimidazole (see paper)
43% identity, 70% coverage: 52:635/838 of query aligns to 12:597/602 of 1x38A
1lq2A Crystal structure of barley beta-d-glucan glucohydrolase isoenzyme exo1 in complex with gluco-phenylimidazole (see paper)
43% identity, 70% coverage: 52:635/838 of query aligns to 12:597/602 of 1lq2A
1j8vA Crystal structure of barley beta-d-glucan glucohydrolase isoenzyme exo1 in complex with 4'-nitrophenyl 3i-thiolaminaritrioside (see paper)
43% identity, 70% coverage: 52:635/838 of query aligns to 12:597/602 of 1j8vA
1iewA Crystal structure of barley beta-d-glucan glucohydrolase isoenzyme exo1 in complex with 2-deoxy-2-fluoro-alpha-d-glucoside (see paper)
43% identity, 70% coverage: 52:635/838 of query aligns to 12:597/602 of 1iewA
1ievA Crystal structure of barley beta-d-glucan glucohydrolase isoenzyme exo1 in complex with cyclohexitol (see paper)
43% identity, 70% coverage: 52:635/838 of query aligns to 12:597/602 of 1ievA
1ex1A Beta-d-glucan exohydrolase from barley (see paper)
43% identity, 70% coverage: 52:635/838 of query aligns to 12:597/602 of 1ex1A
6jgaA Crystal structure of barley exohydrolasei w286f in complex with 4'- nitrophenyl thiolaminaribioside (see paper)
42% identity, 71% coverage: 41:635/838 of query aligns to 3:601/606 of 6jgaA
6jg7A Crystal structure of barley exohydrolasei w286f in complex with methyl 2-thio-beta-sophoroside (see paper)
42% identity, 71% coverage: 41:635/838 of query aligns to 3:601/606 of 6jg7A
6jg2A Crystal structure of barley exohydrolasei wildtype in complex with 4'- nitrophenyl thiolaminaribioside (see paper)
42% identity, 71% coverage: 41:635/838 of query aligns to 1:598/603 of 6jg2A
6jg6A Crystal structure of barley exohydrolasei w286a mutant in complex with methyl 6-thio-beta-gentiobioside (see paper)
42% identity, 71% coverage: 41:635/838 of query aligns to 3:601/606 of 6jg6A
5m6gA Crystal structure glucan 1,4-beta-glucosidase from saccharopolyspora erythraea
44% identity, 70% coverage: 55:637/838 of query aligns to 14:578/579 of 5m6gA
5jp0A Bacteroides ovatus xyloglucan pul gh3b with bound glucose (see paper)
29% identity, 71% coverage: 46:640/838 of query aligns to 4:625/745 of 5jp0A
Sites not aligning to the query:
5z9sA Functional and structural characterization of a beta-glucosidase involved in saponin metabolism from intestinal bacteria (see paper)
35% identity, 49% coverage: 54:466/838 of query aligns to 3:400/765 of 5z9sA
Sites not aligning to the query:
3u48B From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
30% identity, 70% coverage: 52:638/838 of query aligns to 2:619/742 of 3u48B
Sites not aligning to the query:
5xxmA Crystal structure of gh3 beta-glucosidase from bacteroides thetaiotaomicron in complex with gluconolactone (see paper)
29% identity, 72% coverage: 52:655/838 of query aligns to 5:650/749 of 5xxmA
Sites not aligning to the query:
>N515DRAFT_3248 FitnessBrowser__Dyella79:N515DRAFT_3248
MLAFVRRLRIAPIALAIALACLPLGAAPAADTAVHPEQWPAAKWPLPRNAALEQRVAELM
AKMSVEEKVGQLIQADISAVTPEDVRKYRLGSILAGGNSKPEGKTTATAEQWKALADAFH
RAAMDTSGGHQAIPLLIGIDAVHGHNNTVGATLFPQNSALGATRDPQLIREIGAATAAEV
RATGINWTFAPTLAVPQDLRWGRSYEGYSQDPKVVAQYASAMIEGLQGKAGTPKFLDASH
VIASAKHFLADGGTKDGKDQGDAQVSETELREVHAAGYPPAIDAGVQTVMASFSSWNGQK
MHGNKALLTDVLKGRMDFQGFVVGDWNGHGQVPGCSNTDCPASINAGVDMLMAPDSWRGL
YEHTLAEAKSGAIPAARLDDAVARILRVKFRLGLFEAGAPSTQPLATKSAEVIGSAAHRA
LARRAVRESLVLLKNNHGVLPLDPRKHILVAGDAADNISRQSGGWTLTWQGTGLGNKDFP
GAQSIGAGIAEQVKAAGGQVEIAADGRYTNKPDVAVVVFGEDPYAEFQGDLPNLLYRPGD
EHDLELLRRLHGDGIPVVAVFLSGRPLWVNREINVADAFVAAWLPGSEGGGVADVLLRKR
DGKIANDFHGKLAYAWPGSGVHGQGESRFPFGYGLRYADHAEALDLPEASGITGEQIPVG
NYLERGKSVRGYTFRLLGADGVAVAGDTSKSGTADGSLRMSALDYKAQEDARRFEWKKNG
AELAIQSRAPFDLDRQTNGDVLLVTTLRVDALPGKDAWIGMGCGAGCKGRVNLGPTLTSL
PAGTWTRVGVPLKCFRTAGADMHRIDQPFVWGAGAGSSLALARVALGTDADQVVDCPR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory