SitesBLAST
Comparing Pf1N1B4_4413 FitnessBrowser__pseudo1_N1B4:Pf1N1B4_4413 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
O59010 Glutamate transporter homolog; Glt(Ph); Sodium-aspartate symporter Glt(Ph); Sodium-dependent aspartate transporter from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 3 papers)
32% identity, 88% coverage: 11:405/451 of query aligns to 15:420/425 of O59010
- S65 (≠ T55) mutation to V: Strongly decreased chloride conductance.
- R276 (≠ S266) mutation to S: Increased rate of aspartate transport; when associated with R-395.
- RSS 276:278 (≠ SSS 266:268) binding
- M311 (≠ P301) mutation to A: Decreased dependence of aspartate binding on Na(+) concentration.
- T314 (≠ Q304) binding
- V355 (= V345) binding
- D394 (≠ S379) binding
- M395 (≠ E380) mutation to R: Increased rate of aspartate transport; when associated with S-276.
- R397 (= R382) mutation to A: Strongly decreased affinity for aspartate.
- N401 (= N386) binding
- D405 (≠ N390) mutation to N: Strongly decreased affinity for aspartate.
2nwwA Crystal structure of gltph in complex with tboa (see paper)
32% identity, 86% coverage: 11:399/451 of query aligns to 6:405/407 of 2nwwA
- binding (3s)-3-(benzyloxy)-l-aspartic acid: R267 (≠ S266), S268 (= S267), S269 (= S268), T305 (≠ Q304), G348 (= G347), A349 (≠ S348), G350 (= G349), D385 (≠ S379), R388 (= R382), T389 (≠ A383), N392 (= N386)
6x15A Inward-facing state of the glutamate transporter homologue gltph in complex with l-aspartate and sodium ions (see paper)
32% identity, 87% coverage: 11:404/451 of query aligns to 15:419/419 of 6x15A
- binding [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate: K15 (≠ Q11), I18 (= I14), Y42 (≠ A32), P45 (= P35), F46 (≠ L36), F46 (≠ L36), F46 (≠ L36), L49 (≠ A39), L49 (≠ A39), L53 (= L43), I73 (≠ M63), P75 (≠ N65), K84 (≠ R75), L90 (≠ E81), L91 (≠ V82), L91 (≠ V82), F95 (≠ L86), L130 (≠ F128), V131 (≠ M129), I133 (≠ F131), L134 (≠ V132), I137 (= I135), L152 (= L150), F156 (≠ L154), I159 (= I157), I163 (≠ V161), I163 (≠ V161), I163 (≠ V161), A164 (= A162), Y167 (≠ H165), Y167 (≠ H165), K196 (≠ R186), I197 (= I187), N199 (= N189), G200 (≠ M190), Y204 (≠ L194), I207 (= I197), F210 (= F200), L250 (≠ I240), I253 (≠ Y243), Y254 (≠ S244), Y254 (≠ S244), I262 (≠ L252), K266 (= K256), M269 (≠ L259), T334 (= T324), V335 (≠ L325), G336 (≠ T326), Q337 (≠ D327), L339 (= L329), T340 (≠ I330), L343 (≠ A333), S369 (= S359), M399 (≠ I384)
- binding aspartic acid: R276 (≠ S266), S277 (= S267), S278 (= S268), T314 (≠ Q304), T352 (≠ S342), G354 (= G344), V355 (= V345), G357 (= G347), A358 (≠ S348), G359 (= G349), D394 (≠ S379), R397 (= R382), T398 (≠ A383), N401 (= N386)
- binding sodium ion: Y89 (≠ F80), T92 (≠ V83), S93 (= S84), G306 (= G296), A307 (≠ L297), T308 (= T298), N310 (= N300), N310 (= N300), M311 (≠ P301), D312 (= D302), S349 (= S339), I350 (≠ K340), G351 (= G341), T352 (≠ S342), N401 (= N386), V402 (≠ T387), D405 (≠ N390)
Sites not aligning to the query:
6x14A Inward-facing state of the glutamate transporter homologue gltph in complex with tfb-tboa (see paper)
32% identity, 86% coverage: 11:399/451 of query aligns to 12:411/413 of 6x14A
- binding [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate: G66 (= G59), A67 (≠ I60), I70 (≠ M63), V83 (≠ L77), I157 (≠ L158), Y164 (≠ H165), K193 (≠ R186), I194 (= I187), N196 (= N189), G197 (≠ M190), Q200 (≠ R193), Y201 (≠ L194), L302 (≠ S295), T305 (= T298), I306 (≠ F299), I347 (≠ K340), A350 (= A343)
- binding (2~{S},3~{S})-2-azanyl-3-[[3-[[4-(trifluoromethyl)phenyl]carbonylamino]phenyl]methoxy]butanedioic acid: I13 (≠ V12), F47 (= F40), M199 (= M192), R273 (≠ S266), S274 (= S267), S275 (= S268), M308 (≠ P301), T311 (≠ Q304), P353 (≠ T346), G356 (= G349), A357 (≠ F350), L384 (= L372), D391 (≠ S379), R394 (= R382), T395 (≠ A383)
Sites not aligning to the query:
6bavA Crystal structure of gltph r397c in complex with s-benzyl-l-cysteine (see paper)
32% identity, 87% coverage: 11:402/451 of query aligns to 7:409/409 of 6bavA
- binding benzylcysteine: R268 (≠ S266), S269 (= S267), S270 (= S268), M303 (≠ P301), T306 (≠ Q304), Y309 (= Y307), D382 (= D375), D386 (≠ S379), C389 (≠ R382), T390 (≠ A383), N393 (= N386)
6bauA Crystal structure of gltph r397c in complex with l-cysteine (see paper)
32% identity, 86% coverage: 11:399/451 of query aligns to 7:406/408 of 6bauA
- binding cysteine: R268 (≠ S266), S270 (= S268), M303 (≠ P301), T306 (≠ Q304), A345 (= A343), G346 (= G344), V347 (= V345), P348 (≠ T346), G351 (= G349), D386 (≠ S379), C389 (≠ R382), T390 (≠ A383), N393 (= N386)
6r7rA Crystal structure of the glutamate transporter homologue glttk in complex with d-aspartate (see paper)
32% identity, 88% coverage: 11:408/451 of query aligns to 6:412/416 of 6r7rA
- binding d-aspartic acid: R263 (≠ S266), S264 (= S267), S265 (= S268), M299 (≠ P301), T302 (≠ Q304), T340 (≠ S342), A341 (= A343), G342 (= G344), V343 (= V345), G347 (= G349), D383 (≠ S379), R386 (= R382), T387 (≠ A383), N390 (= N386)
- binding decyl-beta-d-maltopyranoside: H23 (≠ E28), V211 (≠ S214), V212 (≠ L215), A216 (≠ G219), K217 (= K220), G220 (≠ A223)
6zl4A The structure of glutamate transporter homologue glttk in complex with the photo switchable compound (cis) (see paper)
32% identity, 88% coverage: 11:408/451 of query aligns to 10:420/424 of 6zl4A
- binding decyl-beta-d-maltopyranoside: Y190 (≠ F185), L191 (≠ R186), G194 (≠ N189), G195 (≠ M190), Q198 (≠ R193), R282 (≠ I276), E286 (= E280)
- binding (2~{S},3~{S})-2-azanyl-3-[[4-[2-(4-methoxyphenyl)hydrazinyl]phenyl]methoxy]butanedioic acid: R271 (≠ S266), S272 (= S267), S273 (= S268), M307 (≠ P301), T310 (≠ Q304), V351 (= V345), P352 (≠ T346), G353 (= G347), A354 (≠ S348), G355 (= G349), D391 (≠ S379), R394 (= R382), T395 (≠ A383), N398 (= N386)
Sites not aligning to the query:
6zgbA Glutamate transporter homologue glttk in complex with a photo cage compound (see paper)
32% identity, 88% coverage: 11:408/451 of query aligns to 11:421/425 of 6zgbA
6xwnB Structure of glutamate transporter homologue glttk in the presence of tboa inhibitor (see paper)
32% identity, 88% coverage: 11:408/451 of query aligns to 13:423/426 of 6xwnB
5e9sA Crystal structure of substrate-bound glutamate transporter homologue glttk (see paper)
32% identity, 88% coverage: 11:408/451 of query aligns to 13:423/427 of 5e9sA