Comparing SM_b20292 FitnessBrowser__Smeli:SM_b20292 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
1us4A Putative glur0 ligand binding core with l-glutamate (see paper)
37% identity, 91% coverage: 30:326/327 of query aligns to 2:297/297 of 1us4A
>SM_b20292 FitnessBrowser__Smeli:SM_b20292
MKHERITLRGAQIAALSAALFFSGGAAAQQKFVTIGTGGVTGVYYAAGGAICRLLNKDRK
SHGIRCSVESTGGSAFNVNTIKEGELDFGMAQSDVQYNAMKGEESFKEGGAHADLRAVFS
IHPEPFTVLAHPNAGVTKFEDFKGKRFNVGNPGSGTRASMERLLGAMGWTLADFSLASEL
KADEHGPALCDGKIDGFFYGVGHPSANIQDPTTTCAAKLVPLTGEVVDKLVADNPYYAKA
TIPGGLYNNNPEDTETFGVLATLVTSANVPEESVYALTKAVFENFDEFKSLHPAFANLEP
AKMIKDGLSAPLHPGAEKYYKEKGWLK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory