Comparing SM_b20902 FitnessBrowser__Smeli:SM_b20902 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4ywhA Crystal structure of an abc transporter solute binding protein (ipr025997) from actinobacillus succinogenes 130z (asuc_0499, target efi-511068) with bound d-xylose
45% identity, 89% coverage: 24:331/345 of query aligns to 2:306/310 of 4ywhA
3ma0A Closed liganded crystal structure of xylose binding protein from escherichia coli (see paper)
43% identity, 90% coverage: 24:332/345 of query aligns to 1:306/313 of 3ma0A
3uugA Crystal structure of the periplasmic sugar binding protein chve (see paper)
33% identity, 88% coverage: 28:332/345 of query aligns to 5:327/329 of 3uugA
3urmA Crystal structure of the periplasmic sugar binding protein chve (see paper)
33% identity, 88% coverage: 28:332/345 of query aligns to 5:327/329 of 3urmA
4wwhA Crystal structure of an abc transporter solute binding protein (ipr025997) from mycobacterium smegmatis (msmeg_1704, target efi- 510967) with bound d-galactose
32% identity, 88% coverage: 28:332/345 of query aligns to 5:327/329 of 4wwhA
4ys6A Crystal structure of an abc transporter solute binding protein (ipr025997) from clostridium phytofermentans (cphy_1585, target efi- 511156) with bound beta-d-glucose
31% identity, 89% coverage: 27:332/345 of query aligns to 2:322/324 of 4ys6A
4rxuA Crystal structure of carbohydrate transporter solute binding protein caur_1924 from chloroflexus aurantiacus, target efi-511158, in complex with d-glucose
33% identity, 89% coverage: 24:329/345 of query aligns to 2:332/340 of 4rxuA
P0AEE5 D-galactose/methyl-galactoside binding periplasmic protein MglB; D-galactose-binding periplasmic protein; GBP; D-galactose/D-glucose-binding protein; GGBP from Escherichia coli (strain K12) (see 4 papers)
31% identity, 81% coverage: 6:284/345 of query aligns to 4:299/332 of P0AEE5
Sites not aligning to the query:
6s3tA P46, an immunodominant surface protein from mycoplasma hyopneumoniae (see paper)
28% identity, 68% coverage: 85:320/345 of query aligns to 72:372/374 of 6s3tA
Sites not aligning to the query:
6ruxA P46, an immunodominant surface protein from mycoplasma hyopneumoniae (see paper)
28% identity, 68% coverage: 85:320/345 of query aligns to 70:370/373 of 6ruxA
P23905 D-galactose/methyl-galactoside binding periplasmic protein MglB; D-galactose-binding periplasmic protein; GBP; D-galactose/D-glucose-binding protein; GGBP from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
30% identity, 81% coverage: 6:284/345 of query aligns to 4:299/332 of P23905
2gbpA Sugar and signal-transducer binding sites of the escherichia coli galactose chemoreceptor protein (see paper)
30% identity, 75% coverage: 25:284/345 of query aligns to 2:276/309 of 2gbpA
2qw1A Glucose/galactose binding protein bound to 3-o-methyl d-glucose (see paper)
30% identity, 75% coverage: 25:284/345 of query aligns to 1:275/305 of 2qw1A
5kwsA Crystal structure of galactose binding protein from yersinia pestis in the complex with beta d glucose
29% identity, 85% coverage: 28:319/345 of query aligns to 5:303/307 of 5kwsA
1gcaA The 1.7 angstroms refined x-ray structure of the periplasmic glucose(slash)galactose receptor from salmonella typhimurium (see paper)
30% identity, 75% coverage: 25:284/345 of query aligns to 2:276/309 of 1gcaA