Comparing SM_b21149 FitnessBrowser__Smeli:SM_b21149 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
P02916 Maltose/maltodextrin transport system permease protein MalF from Escherichia coli (strain K12) (see 4 papers)
32% identity, 82% coverage: 46:286/294 of query aligns to 258:510/514 of P02916
4ki0F Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to maltohexaose (see paper)
32% identity, 80% coverage: 46:279/294 of query aligns to 243:488/490 of 4ki0F
P94529 Arabinooligosaccharides transport system permease protein AraP from Bacillus subtilis (strain 168) (see paper)
26% identity, 85% coverage: 17:265/294 of query aligns to 38:286/313 of P94529
7cagA Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state (see paper)
26% identity, 98% coverage: 4:291/294 of query aligns to 3:285/285 of 7cagA
>SM_b21149 FitnessBrowser__Smeli:SM_b21149
MSVRRSTIIFAWVLLLPAVFYVTVIVAYPLVDTFVLSFTDASLKKTTKWVGTANYDKIFN
ATFAEVILRTFVWTAFSVTIKMIIGTFGAVMLNAAVPGRALFRVLTMPPWIVPMAIGIFM
WGWMYNGQFGMISGTLQNWGLVDGPVAFLAHGSTAFWATIVTDVWIGVPLVTLYMLASMQ
AIPQDLYEAAWTDGAGRFYRFRRITLPLLVPSMITMSMLSLIATFNSFDIIWILTQGGPN
GDTTTMIIDTYRTAIGSKKYGEGAARAVLICIFLSIFCIAYFRVTHRLATGESR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory