Comparing SMc04347 FitnessBrowser__Smeli:SMc04347 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
3zyyX Reductive activator for corrinoid,iron-sulfur protein (see paper)
31% identity, 94% coverage: 15:654/683 of query aligns to 4:628/628 of 3zyyX
4c1nI Corrinoid protein reactivation complex with activator (see paper)
32% identity, 75% coverage: 144:654/683 of query aligns to 10:509/509 of 4c1nI
>SMc04347 FitnessBrowser__Smeli:SMc04347
MLNVPSKDEKNDPLVLFMPSGKRGRFPVGTPILDAARSLGVYVESVCGGRATCGRCQVSV
QEGNFAKHKIVSSSDHISPIGPKEQRYASVRELPDGRRLSCSSQILGDLVIDVPQDTVIN
AQVVRKAASDRVIERNAAVQLCYVEIDEPDMHKPLGDLDRMKAVLEKDWGWKDLLIAPHL
IPQVQGILRKGNWAVTAAIHRDMDSSRPFIVALWPGLKNEAYGVACDIGSTTIAMHLVSL
LSGRIVASSGTSNPQIRFGEDLMSRVSYVMMNPDGREAMTKAVREALNGLIGKVCAEGEV
DRHDILDMVVVANPIMHHLFLGIDPTELGQAPFALAVSGALQYWAHEIDIEVNRGARLYM
LPCIAGHVGADAAGATLSEGPHRQDKMMLLVDVGTNAEIVLGNRERVVAASSPTGPAFEG
AEISSGQRAAPGAIERVRIDPETLEPRFRVIGVDKWSNEEGFAEAAAAVGVTGICGSAII
EVVAEMYLTGIISQDGVVDGAMVAKSPRIIPNGRTFSYLLHEGEQRITVTQNDIRAIQLA
KSALYAGIKLLMEKQGVDHVDTIRFAGAFGSFIDPKYAMVLGLIPDCDLTEVKAVGNAAG
TGALMALLNRGHRREIEQTVRKIEKIETALESKFQEHFVNAMAMPNKVDAFPKLAEVVTL
PARKSLTDDGGEGSGRRRRRSRE
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory