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Information about 10356898_71_256

Unaligned length: 186

Alignment length: 716

Description in the alignment: single domain, from Coraliomargarita akajimensis DSM 45221

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>10356898_71_256
EILFDGSTLEQFNPSKWKIVDGNLVAGPGGLQSKKAYGDLQMHLEWRTPDPKLALKKPNN
MGNNGLKLMGHYEIQIFDSYTCRIYADGSAGAVYAQTPPAVNVCRKPGEWQTFDIYFTAP
VFENEKLVQPGYVTVLHNGVFIHHNTEILGKTAHKKEQVYVPHAARMPFYFAGHGSPVEF
RNIWIR

Aligned sequence

>10356898_71_256
------------------------------------------------------------
------------------------------------------------------------
--------------------------------EI----LF-D-GS--TL-EQ-------F
N---PS----------KW------------------------------------KIVD-G
---------------------------NLV---------------------------AGP
G-GLQS-----K-----K--AY-G-DLQMHLEWRTP-------------DP---KLALKK
-------------------PNNMGNNGLKLMGH---------------------------
---------------Y-EIQIFD------SYTC--------------------RIYADGS
AGAVY----------------------------------------------AQTP-----
---PA--VNVCRKPGEWQTFDI--YF-T-APVFENEK----LVQPGYVT--V-LHN-GVF
IHHNTEILGKTAHKKEQV-------------------YVPHAARMPFYFA--GHG-----
-------S--------------------PVE--FRNIWIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory