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Information about 11129142_59_261

Unaligned length: 203

Alignment length: 716

Description in the alignment: single domain, near sugar dehydrogenase, from Aquiflexum balticum BA160, DSM 16537

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>11129142_59_261
GWMLLFDGVNTDGWRAFNGDTLPPNWTVEDGALKGLGHDGGDVGGDIVFAPLEFEQFEME
FTWKIATGGNSGVFYHVVEDPKYAAPYYTGPEYQVIDQLGFPQPLEDWQSLAGDYAMYVP
DFEGVVKPAGEWNVSKIIFTNEKAEYYLNGKKTVEFVPYSEDWNTKRNSGKWDDFTDYAI
SKSGLIALQDHGSEVWFKNIKIR

Aligned sequence

>11129142_59_261
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWMLLF-D-GV--NT-DG-------W
R---AFNGDTL---PPNW------------------------------------TVED-G
---------------------------ALK--------------------GLGHDGGDVG
G-DIVF-----A-----P-LEF-E-QFEMEFTWKI---------------AT-GG-----
------------------------NSGVFYHVV---------------------------
EDPKYA---APYYTGP-EYQVID------QLGFP------------------QPLEDWQS
LAGDYAM---------------------------------------------YVP-----
---DF--EGVVKPAGEWNVSKI--IF-T-NEK---------------AE--Y-YLN-GKK
TVEFVPYSEDWNTKRNSGKWD-------------DFTDYAISKSGLIALQ--DHG-----
-------S--------------------EVW--FKNIKIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory