Information about 6005885_41_249

Unaligned length: 209

Alignment length: 716

Description in the alignment: single domain, from Verrucomicrobium spinosum DSM 4136

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

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Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

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Sequence

>6005885_41_249
VILDGSRQMLDEKWTYWEGPRFASALPIKWKVVEDPVDGGSAIMTDDRAADKGKYGAADI
VTKKPYRDFRLHIEFYITKPGGNSGVYLQNRYEIQVLDGDKTKHGMGAVINETESPYDAY
LGVGKWNSYDIVFRAARFEDGKLVEKPLVTMYFNGKKVHKNVAISKVWGGPNSGVDGGNN
NGFGITDTPQGLKLQCEGHDVRYRNAWIK

Aligned sequence

>6005885_41_249
------------------------------------------------------------
------------------------------------------------------------
---------------------VILDGSRQMLDEK--------------W-TY-------W
E---GPRFASA--LPIKW------------------------------------KVVE-D
---------------------------PVDGGSAI-----------MTDDRAADKGKYGA
A-DIVT-----K-----K--PY-R-DFRLHIEFYI--------------TKP-GG-----
------------------------NSGVYLQNR---------------------------
---------------Y-EIQVLD------GDKT------------------------KHG
MGAVI----------------------------------------------NETE-----
---SP--YDAYLGVGKWNSYDI--VF-R-AARFEDGK----LVEKPLVT--M-YFN-GKK
VHKNVAISKVWGGPNSGVDGGN------------NNGFGITDTPQGLKLQ--CEG-----
-------H--------------------DVR--YRNAWIK----------------

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