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Information about 6254985_35_202

Unaligned length: 168

Alignment length: 716

Description in the alignment: single domain, from Chthoniobacter flavus Ellin428

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>6254985_35_202
GFTPLIAAHDLSGWQNAATAAEHWKVENGELINDGQGADLVTAKSYRNFELRLEWKIPVR
GDSGVYLPGGQQVQIWAKDSGSGGFVYNHKYTVSPSVVADKPLGEWNTFVIRLVDGKVTV
TLNDKVVMQDVPVEKGFDPPMRGPEEGALRLQKSPHNVMTTFRNIFIR

Aligned sequence

>6254985_35_202
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GFTPLI-A-AH--DL-SG-------W
Q---NAATA-----AEHW------------------------------------KVEN-G
---------------------------ELI-------------------------NDGQG
A-DLVT-----A-----K--SY-R-NFELRLEWKI---------------PV-RG-----
------------------------DSGVYLPGG---------------------------
---------------Q-QVQIWA------KDSG--------------------------S
GGFVYN---------------------------------------------HKYTV----
--SPS--VVADKPLGEWNTFVI--RL-V-DGK---------------VT--V-TLN-DKV
VMQDVPVEKGFDPPMR------------------------GPEEGALRLQ--KSP-----
-------H--------------------NVMTTFRNIFIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory