Information about 7470545_41_248

Unaligned length: 208

Alignment length: 716

Description in the alignment: single domain, from Chitinophaga pinensis DSM 2588

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

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Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

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Sequence

>7470545_41_248
DLSAFREPGQSWSITSDASAKLDNPHVLDAVAGTGVLFNMPDKKHPGKDLFSSAEFGDAD
IELDYMMAPGSNSGIYLQGRYEIQLLDSWGTKAPKAGDNGGIYERWDDSRPNGLQGYDGH
APRVNASKAPGTWQHIKISFIAPRFDATGKKIANARMLLVELNGVTIQENVELMGPTRGA
IGGGDEKATGPLRLQGDHGAVAFRNIVI

Aligned sequence

>7470545_41_248
------------------------------------------------------------
------------------------------------------------------------
-------------------------------DLS-----------------A-------F
R---EPGQSWS--ITSDASAKLDN------------------------PHVLDAVAGT-G
---------------------------VLF---------------------NMPDKKHPG
K-DLFS-----S-----A--EF-G-DADIELDYMM---------------AP-GS-----
------------------------NSGIYLQGR---------------------------
---------------Y-EIQLLD------SWGT--------------------KAPKAGD
NGGIYERWDDSR--------------------------------PNGLQG----YDG---
-HAPR--VNASKAPGTWQHIKI--SF-I-APRFDATGK--KIANARMLL--V-ELN-GVT
IQENVELMGPTRGAIGG---------------------GDEKATGPLRLQ-GDHG-----
-------A---------------------VA--FRNIVI-----------------

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